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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946274.1_cds_XP_016488491.1_79121
CDS Infomation

[gene=LOC107808474] [db_xref=GeneID:107808474] [protein=inositol-3-phosphate synthase-like] [protein_id=XP_016488491.1] [location=complement(join(9305..9424,10476..10538,10773..10961,11055..11231,11476..11591,12024..12250,12352..12599,13404..13539,13715..13783,14205..14392))] [gbkey=CDS]
Sequence

ATGTTTATTGAGAATTTTAAGGTTGAAAGCCCAAATGTGAAATACACAGAAAATGAGATT
CGCTCTGTGTATGATTATCAAACCACAGAGCTTGTTCATGAAGAGAAAAATGGTTCTTAT
CAATGGACTGTCAAGCCAAAATGTGTCAAATATGAGTTCAAAACTGATACCAATGTTCCC
AAATTAGGGGTTATGCTTGTTGGATGGGGAGGAAACAATGGTTCAACTTTGACAGGAGGT
ATTATTGCTAATAAAGAAGGAATTTCATGGGCAACAAAAGAGAAGGTGCAACAAGCCAAT
TACTTTGGGTCTCTTACTCAGGCATCAACAATTAGAGTTGGATCTTTCAATGGAGAAGAG
ATCTATGCCCCTTTCAAGAGCCTCCTTCCCATGGTTAATCCAGATGATGTAGTATTTGGA
GGATGGGACATTAGCAACATGAATTTGGCAGATGCTATGGTCAGGGCTAAGGTTTTCGAC
ATTGATCTGCAAAACCAGCTGAGGCCATACATGGAATCAATGGTCCCCCTTCCCGGTATC
TATGACCCTGACTTCATTGCTGCTAACCAAGAATCACGCGCCAACAACGTGATCAAAGGA
ACCAAGAAAGAACAAGTTGATCAAATTGTTAAAGATATTAGGGAGTTCAAGGAGAAGAAT
AAGGTAGACAAGATTGTGGTGCTGTGGACAGCCAACACTGAAAGATACAGCAATGTGATT
GTAGGACTTAATGACACAATGGAAAACCTTTTGGCTGCTGTGGATAGAGATGAAGCTGAA
ATATCTCCTTCTACATTGTATGCTATTGCTTGTGTTCTTGAAAATGTGCCTTTTATCAAT
GGAAGTCCACAGAACACTTTTGTCCCAGGTCTAATTGATTTGGCCATAAAGAGGAACACT
TTGATTGGTGGTGATGACTTTAAGAGTGGTCAAACCAAGATGAAGTCAGTGCTGGTTGAT
TTCCTAGTTGGAGCCGGTATTAAGCCAACATCAATTGTGAGCTACAATCACCTGGGTAAC
AATGATGGAATGAATCTTTCCGCCCCTCAAACTTTCCGGTCTAAGGAGATCTCGAAGAGC
AATGTTGTCGATGACATGGTTTCCAGCAACGCCATTCTCTATGAAGCTGGCGAGCATCCT
GACCATGTTGTTGTGATCAAGTATGTCCCCTATGTTGGAGATAGTAAGAGAGCAATGGAT
GAGTACACATCAGAGATTTTCATGGGTGGAAAGAACACAATAGTTTTGCACAACACTTGT
GAGGATTCTCTTTTGGCAGCTCCAATTATATTAGACTTGGTCCTTCTCGCCGAACTCAGC
ACTCGCATTCAGCTCAAAGCTGAAGGAGAGGGGAAGTTCCATTCTTTCCATCCTGTGGCT
ACTATACTCAGCTACCTCACAAAGGCTCCTCTGGTACCACCAGGTACACCAGTGGTGAAT
GCCCTGTCAAAGCAGAGGGCAATGCTTGAGAATATACTGAGAGCTTGTGTTGGTTTGGCA
CCAGAGAACAACATGATTTTGGAATACAAATGA

Peptide Sequence

PEP ID

XP_016488491.1
PEP Infomation

PREDICTED: inositol-3-phosphate synthase-like [Nicotiana tabacum]
Sequence

MFIENFKVESPNVKYTENEIRSVYDYQTTELVHEEKNGSYQWTVKPKCVKYEFKTDTNVP
KLGVMLVGWGGNNGSTLTGGIIANKEGISWATKEKVQQANYFGSLTQASTIRVGSFNGEE
IYAPFKSLLPMVNPDDVVFGGWDISNMNLADAMVRAKVFDIDLQNQLRPYMESMVPLPGI
YDPDFIAANQESRANNVIKGTKKEQVDQIVKDIREFKEKNKVDKIVVLWTANTERYSNVI
VGLNDTMENLLAAVDRDEAEISPSTLYAIACVLENVPFINGSPQNTFVPGLIDLAIKRNT
LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKS
NVVDDMVSSNAILYEAGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTC
EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVN
ALSKQRAMLENILRACVGLAPENNMILEYK

Transcript Sequence

Gene sequence data has not been registered.